Workshop OBI Vancouver 2008 Jan notes

Vancouver Notes Pages by Melanie Courtot and Helen Parkinson
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Monday Jan 28 Notes

Tuesday Jan 29 Notes

Wednesday Jan 30 Notes

Thursday Jan 31 Notes

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Files from Workshop

 * Richard Scheuermann: [[Media:OBI_Workshop_JAN2008_Richard.pdf]]
 * Richard Scheuermann Use case for protocol app: [[Media:MSSM_PB1-F2_experiments-1.xls|Spreadsheet File here]]
 * Richard Scheuermann Use case example for data model clinical phenotype: [[Media:Example_data_model_clinical_phenotype_v0.1.xls|Spreadsheet File here]]
 * James Malone (for data transformation): [[Media:Obi_datatransf_vancouver.ppt]]
 * Jennifer Fostel (for role branch): [[Media:Fostel_OBI-rolebranch-issues.ppt]]
 * Liju Fan (for relations branch): [[Media:Fan_RelationsBranchStatusReport_012808.ppt]]
 * Susanna Sansone (for Biomaterial): [[Media:Sansone_OBIBiomaterialBranchUCs.ppt]]
 * Alan Ruttenberg (for DENRI): http://ashby.csail.mit.edu/presentations/DenrieReport.pdf
 * Philippe Rocca-Serra (for plan branch): [[Media:OBI-PlanBranch-Use cases.ppt]]
 * Bill Bug (for function branch): [[Media:FunctionBranchRpt-BB-Jan2008.ppt‎]]
 * Melanie Courot (for instrument branch): [[Media:Instrument_UC.pdf]]

Participants In person --
 * Melanie Courtot,
 * Ryan Brinkman,
 * Helen Parkinson,
 * Liju Fan,
 * James Malone,
 * Philippe Rocca-Serra,
 * Susanna Sansone,
 * Alan Ruttenberg
 * Barry Smith,
 * Richard Scheuerman,
 * Bill Bug,
 * Bjoern Peters,
 * Jason Greenbaum

Also attending: -
 * Cartik Kothari, (Mark Wilkinson's group) - developing ontology for gel electrophoresis experiments
 * John Westbrook - Structural Biology, pdb - sites that do direct data acquisition for PDB archive (EBI, USA, Japan)

By Phone/Centra: ---
 * Jennifer Fostel,
 * Rashid from CEBS,
 * Daniel Schober,
 * Elisabetta Manduchi,
 * Raki Bhat,
 * Chris Stoeckert