Workshop San Diego 2007

== Workshop planning San Diego 2007 == The workshop will take place at [[|https://www.cbil.upenn.edu/obiwiki/index.php/SanDiego2007WorkshopPrepActionItems LIAI || http://www.liai.org]], in a building too new for google but close to here || http://maps.google.com/maps?fq&hlen&qCampus+Point+Dr,+La+Jolla,+CA+92037&ieUTF8&tk&om1&ll32.877785,-117.232447&spn0.052909,0.10849]].from Jan 29 to Feb 02. There is some SanDiegoTravelInformation. The development work that is being done in preparation for the workshop is listed.

===Protocol record of workshop

=

  • Optional session: Monday Morning 10:00 - 12:00 (OBI only, for people arriving early)
    • Agenda: Discussion and demo of tools + resources.
    • Gilberto Fragoso (Protege Tab for annotations)
    • Allyson Lister (FuGE implementation)
    • Chris Mungall(Phenote)
    • Liju Fan(OWL-DL reasoner)
    • Trish Whetzel (term tracker application)
  • Monday afternoon - 1:00PM - 6PM - Public session
  • Tue 9:00 -10:30 Development process including Milestones
  • Tue 10:30 - 12:30 Minimal Information List for Metadata|
  • Tue 13:00 - 17:00 BFO mapping of misplaced classes
  • Tue 17:00 - 18:00 PATO import discussion
  • Wed 9:00 - 10:00 Metadata action items
  • Wed 10:00 - 11:00 Clinical Trial Ontology
  • Wed 11:00 - 12:00 Split OBI scope into Branches with editors
  • Wed 13:00 Finalize OBI import of PATO
  • Wed 13:00 - 14:00 Review Core Classes in OBO-UBO, use as draft and place OBO ontologies into OBI
  • Wed 14:00 - 18:00 Review Core Classes in OBI, remove unnecessary, arrived at 'vetted' OBI Core
  • Wed 16:00 - 18:00 Formal OWL Relationship between Core Classes
  • Thu 9:00 - 12:00 Develop Study design together
  • Thu 13:00 - 18:00 Split into (two?) groups for development
  • Fri 9:00 - 12:00 Critical Review

===List of Attendees (alphabetical by last name)

=

  • Tina Boussard
  • Ryan Brinkman
  • Bill Bug
  • Simona Carini
  • Alison Deckhut
  • Liju Fan
  • Dawn Field
  • Jennifer Fostel
  • Gilberto Fragoso
  • Jason Greenbaum
  • Jeff Grethe (BIRN)
  • Jamie Lee
  • Suzi Lewis
  • Allyson Lister
  • Maryann Martone (BIRN)
  • Norman Morrison
  • Christine Fennema-Notestine (BIRN)
  • Helen Parkinson
  • Bjoern Peters
  • John Quinn
  • Philippe Rocca-Serra
  • Daniel Rubin
  • Alan Ruttenberg
  • Susanna Sansone
  • Richard Scheuermann
  • Daniel Schober
  • Barry Smith
  • Chris Stoeckert
  • Randi Vita
  • Trish Whetzel
Retrieved from "http://obi-ontology.org/page/Workshop_San_Diego_2007"

Search

Tools

This page